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  2. Mathematical modelling of infectious diseases - Wikipedia

    en.wikipedia.org/wiki/Mathematical_modelling_of...

    Infectious disease dynamics. Mathematical models need to integrate the increasing volume of data being generated on host - pathogen interactions. Many theoretical studies of the population dynamics, structure and evolution of infectious diseases of plants and animals, including humans, are concerned with this problem.

  3. List of COVID-19 simulation models - Wikipedia

    en.wikipedia.org/wiki/List_of_COVID-19...

    COVID-19 simulation models are mathematical infectious disease models for the spread of COVID-19. [1] The list should not be confused with COVID-19 apps used mainly for digital contact tracing . Note that some of the applications listed are website-only models or simulators, and some of those rely on (or use) real-time data from other sources.

  4. Comparison of software for molecular mechanics modeling

    en.wikipedia.org/wiki/Comparison_of_software_for...

    Comparison of software for molecular mechanics modeling. This is a list of computer programs that are predominantly used for molecular mechanics calculations. GPU – GPU accelerated. I – Has interface. Imp – Implicit water. MC – Monte Carlo. MD – Molecular dynamics. Min – Optimization. QM – Quantum mechanics.

  5. List of RNA structure prediction software - Wikipedia

    en.wikipedia.org/wiki/List_of_RNA_structure...

    sourcecode. [19] PknotsRG. A dynamic programming algorithm for the prediction of a restricted class (H-type) of RNA pseudoknots. Yes. sourcecode, webserver. [20] RNA123. Secondary structure prediction via thermodynamic-based folding algorithms and novel structure-based sequence alignment specific for RNA.

  6. AMRFinderPlus - Wikipedia

    en.wikipedia.org/wiki/AMRFinderPlus

    The AMRFinderPlus tool from the National Center for Biotechnology Information (NCBI) is a bioinformatic tool that allows users to identify antimicrobial resistance determinants, stress response, and virulence genes in bacterial genomes. [2] This tool's development began in 2018 (as AMRFinder) and is still underway.

  7. PLOS Pathogens - Wikipedia

    en.wikipedia.org/wiki/PLoS_Pathogens

    PLOS Pathogens is a peer-reviewed open-access medical journal. All content in PLOS Pathogens is published under the Creative Commons "by-attribution" license. PLOS Pathogens began operation in September 2005. It was the fifth journal of the Public Library of Science (PLOS), a non-profit open-access publisher.

  8. Quantitative microbiological risk assessment - Wikipedia

    en.wikipedia.org/wiki/Quantitative...

    Quantitative microbiological risk assessment [1] (QMRA) is the process of estimating the risk from exposure to microorganisms . The process involves measuring known microbial pathogens or indicators and running a Monte Carlo simulation to estimate the risk of transfer. [1] If a dose-response model is available for the microbe, it be used to ...

  9. Molecular Operating Environment - Wikipedia

    en.wikipedia.org/wiki/Molecular_Operating...

    Molecular Operating Environment. Molecular Operating Environment (MOE) is a drug discovery software platform that integrates visualization, modeling and simulations, as well as methodology development, in one package. MOE scientific applications are used by biologists, medicinal chemists and computational chemists in pharmaceutical ...

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