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  2. Mathematical modelling of infectious diseases - Wikipedia

    en.wikipedia.org/wiki/Mathematical_modelling_of...

    Infectious disease dynamics. Mathematical models need to integrate the increasing volume of data being generated on host - pathogen interactions. Many theoretical studies of the population dynamics, structure and evolution of infectious diseases of plants and animals, including humans, are concerned with this problem.

  3. AMRFinderPlus - Wikipedia

    en.wikipedia.org/wiki/AMRFinderPlus

    The AMRFinderPlus tool from the National Center for Biotechnology Information (NCBI) is a bioinformatic tool that allows users to identify antimicrobial resistance determinants, stress response, and virulence genes in bacterial genomes. [2] This tool's development began in 2018 (as AMRFinder) and is still underway.

  4. Pathogenomics - Wikipedia

    en.wikipedia.org/wiki/Pathogenomics

    Pathogenomics is a field which uses high-throughput screening technology and bioinformatics to study encoded microbe resistance, as well as virulence factors (VFs), which enable a microorganism to infect a host and possibly cause disease.

  5. Plant disease forecasting - Wikipedia

    en.wikipedia.org/wiki/Plant_disease_forecasting

    Plant disease forecasting is a management system used to predict the occurrence or change in severity of plant diseases. At the field scale, these systems are used by growers to make economic decisions about disease treatments for control. Often the systems ask the grower a series of questions about the susceptibility of the host crop, and ...

  6. PHI-base - Wikipedia

    en.wikipedia.org/wiki/PHI-base

    Manual Curation. The Pathogen-Host Interactions database ( PHI-base) [1] is a biological database that contains manually curated information on genes experimentally proven to affect the outcome of pathogen-host interactions. The database has been maintained by researchers at Rothamsted Research and external collaborators since 2005.

  7. Source attribution - Wikipedia

    en.wikipedia.org/wiki/Source_attribution

    Source attribution. In the field of epidemiology, source attribution refers to a category of methods with the objective of reconstructing the transmission of an infectious disease from a specific source, such as a population, individual, or location. For example, source attribution methods may be used to trace the origin of a new pathogen that ...

  8. PhytoPath - Wikipedia

    en.wikipedia.org/wiki/PhytoPath

    PhytoPath was a joint scientific project between the European Bioinformatics Institute and Rothamsted Research, running from January 2012 [1] to May 30, 2017. [2] The project aimed to enable the exploitation of the growing body of “-omics” data being generated for phytopathogens, their plant hosts and related model species.

  9. Comparison of software for molecular mechanics modeling

    en.wikipedia.org/wiki/Comparison_of_software_for...

    Comparison of software for molecular mechanics modeling. This is a list of computer programs that are predominantly used for molecular mechanics calculations. GPU – GPU accelerated. I – Has interface. Imp – Implicit water. MC – Monte Carlo. MD – Molecular dynamics. Min – Optimization. QM – Quantum mechanics.

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